Pathology Informatics Summit 2022

Important Conference Rooms
 Speaker Ready Room  Green Room
 API/PI Summit Office  Room 305
 PI Summit Registration  Outside of Room 305


Monday, May 9, 2022

Pre-Conference Workshops

Morning Session

PI Bootcamp Line-Up

(Schedule follows)

Coordinators: Amrom Obstfeld and Ron Jackups
Rooms: 301/302

Presentations:
Databases and Data Management - Peter Gershkovich, MD

Fundamentals of Computer Programming - Devereaux Sellers, MD
Data Analytics: Converting Data into Knowledge - Michelle Stoffel, MD, PhD
The Basics of Artificial Intelligence and Machine Learning – Sorting Fact from Fiction (and Hype) - Alexis Carter, MD
Data Analytics in Anatomic Pathology - John Sinard, MD, PhD
Enterprise Data Analytics: Adding Value to the System - Bruce Levy, MD
So You Want to Make a Dashboard? - Victor Brodsky, MD
Practical Applications of Machine Learning in Pathology - Shannon Haymond, PhD


HIMA Imaging Science Line-Up

(Schedule follows)

Coordinator: Metin Gurcan, PhD 
Room: Ballroom B
 

Presentations:
Data-efficient and Multimodal Computational Pathology - Faisal Mahmoud, PhD
Lessons Learned in Digital and Computational Pathology - S. Joseph Sirintrapun, MD
Pathomics, Clinical Studies and Cancer Surveillance - Joel Saltz, MD, PhD
Computational Image Analysis of Renal Pathology Biopsies of Diabetic Nephropathy - Pinaki Sarder, PhD
Image Analysis at the Crossroads of Digital and Molecular Pathology: Dissecting Complex Cancer Phenotypes Through Data Integration - Beatrice Knudsen, MD, PhD
AI for Routine Pathology Diagnostics: Are we there yet? – Anil Parwani, MD, PhD, MBA

R Language Primer & Programming Symposium on
Data Sciences Line-Up

(Schedule follows)

Coordinator: Amrom Obstfeld, MD, PhD
Rooms: 303/304

(Graphical and Tabular?) Data Visualization - Stephan Kadauke, MD, PhD
Data Understanding - Patrick Mathias, MD, PhD
Data Wrangling - Amrom Obstfeld, MD, PhD
Introduction to R and RStudio for Reproducible Reporting - Joseph Rudolf, MD

Monday, May 9, 2022
Morning Session

Time

Bootcamp
Coordinators:

Amrom Obstfeld, MD, PhD &
Ron Jackups, MD, PhD

Rooms: 301/302

HIMA Imaging Science
Coordinator:

Metin Gurcan, PhD

Room: Ballroom B

R Language Primer and
Programming Symposium
on Data Sciences
Coordinator:
Amrom Obstfeld, MD, PhD

Rooms: 303/304

8:00-8:10 am Introduction to Morning Sessions (8:00-8:05)
Introduction to HIMA
Metin Gurcan, PhD

General Introduction to the Workshop
Amrom Obstfeld, MD, PhD

8:10-9:00 am

Databases and Data Management
Peter Gershkovich, MD

(8:05-8:55)
Data-Efficient and
Multimodal Computational Pathology
Faisal Mahmood, PhD

(8:10-9:50)
Introduction to R and
RStudio for
Reproducible Reporting
Joseph Rudolf, MD

9:00-9:50 am

Fundamentals of Computer Programming

Devereaux Sellers, MD

(8:55-9:50)
Lessons Learned in Digital
and Computational Pathology
S. Joseph Sirintrapun, MD

(Continued)
9:50-10:10 am Refreshment Break
10:10-11:00 am Data Analytics: Converting Data
into Knowledge

Michelle Stoffel, MD, PhD
(10:10-11:05)
Pathomics, Clinical Studies,
and Cancer Surveillance
Joel Saltz, MD, PhD
(10:10-12:00)
 Data Visualization
Stephan Kadauke, MD, PhD
11:00-11:50 am

The Basics of Artificial Intelligence and Machine Learning
Alexis Carter, MD

(11:05-12:00)
Problems and Opportunities in Computational Renal Pathology
Pinaki Sarder, PhD

(continued)
11:50-12:00 pm Conclusion of Morning Sessions  (contintued) (continued)
12:00-1:00 pm Lunch

 

Monday, May 9, 2022
Afternoon Session

Time

Bootcamp
Coordinators:

Amrom Obstfeld, MD, PhD &
Ron Jackups, MD, PhD

Rooms: 301/302

HIMA Imaging Science
Coordinator:

Metin Gurcan, PhD

Room: Ballroom B
R Language Primer and
Programming Symposium
on Data Sciences
Coordinator:
Amrom Obstfeld, MD, PhD

Rooms: 303/304
1:00-1:10 pm Introduction to Afternoon Sessions (1:00-1:55)
Image Analysis at the Crossroads of Digital and Molecular Pathology: Dissecting Complex Cancer Phenotypes Through Data Integration
Beatrice Knudsen, MD, PhD
(1:00-2:50)
Data Wrangling
Amrom Obstfeld, MD, PhD
1:10-2:00 pm Data Analytics in Anatomic Pathology
John Sinard, MD, PhD
(continued)  
2:00-2:50 pm Enterprise Data Analytics: Adding Value to the System
Bruce Levy, MD
(1:55-2:50)
AI for Routine Pathology Diagnostics: Are We There Yet?
Anil Parwani, MD, PhD, MBA
(continued)
2:50-3:10 pm Refreshment Break
3:10-4:00 pm So You Want to Make a Dashboard?
Victor Brodsky, MD
(3:10-5:00)
Panel Discussion

(3:10-5:00)
Data Understanding
Patrick Mathias, MD, PhD

4:00-4:50 pm

Practical Applications of Machine Learning in Pathology

Shannon Haymond, PhD

 (continued) (continued)
4:50-5:00 pm Conclusion of Afternoon Sessions (continued)  (continued)
 

LIVE FROM PI SUMMIT!

Room 306-307, DLCC 
6:00 PM to 6:40 PM
5:30 PM - Light hors d'ouevres and drinks provided for trainees

Our next Monday Mentor, Michael J. Becich, MD, PhD

Chairman and Distinguished University Professor, Department of Biomedical Informatics
Professor of Pathology, Information Sciences, Telecommunications and Clinical/Translational Sciences
Associate Vice Chancellor for Informatics in the Health Sciences
Director, Center for Commercial Application (CCA) of Healthcare Data
Associate Director for Cancer Institute (UPCI)
Associate Director, Clinical and Translational Science Institute (CTSI)
University of Pittsburgh School of Medicine

Monday, May 9th, 6:00-6:40 pm
Host: Yonah Ziemba, MD
Northwell Health

Available via Zoom, too!

REGISTER HERE!



Monday, May 9, 2022

Evening Session

Digital Pathology Association Companion Meeting
Hot Topics in Digital and AI Pathology 2022

Coordinator: Anil Parwani, MD, PhD, MBA
Rooms: 301/302 
Time Topic
5:00 - 5:20 PM Deploying AI Solutions for Clinical Diagnostics: Current State and Future Directions
Anil Parwani, MD, PhD, MBA
5:20 - 5:45 PM Pathologist Involvement in Deep Learning Models to Improve Clinical Adoption
Beatrice Knudsen, MD, PhD
5:45 - 6:10 PM Building Data Repositories for Wide-spread Digital Pathology Education and Research
Rajendra Singh, MD
6:10 - 6:35 PM Leveraging Data from the College of American Pathologists to Address Challenges in Machine Learning
Michelle Stram, MD, ScM
6:35 - 7:00 PM AI-Based Pathology Predicts Origins for Cancers of Unknown Primary
Faisal Mahmood, PhD

 

Tuesday, May 10, 2022
Morning Session

Short Abstract Presentations
*Running concurrently

8:00 - 9:00 AM Moderator: Ulysses Balis
Rooms: 301/302
Moderator: David McClintock
Room: Ballroom B
Moderator: Lisa-Jean Clifford
Rooms: 303/304


Morning Track Lectures
 

  Track 1: Artificial Intelligence
Rooms: 301/302
Moderator: Steven Hart

Track 2: Applied Informatics
Room: Ballroom B

Moderator: S. Joe Sirintrapun

Track 3: Selected Podium Presentations
Rooms: 303/304

Moderator: Michelle Stoffel

9:00 - 9:35 AM Explainable AI(xAI) Applications in Pathology
Jeffrey Fine, MD
Laboratory Information Systems 1972 to 2022 50 Years of Evolution, Revolution, Innovation, and Frustration
Dennis Winsten

Automated Reporting of Critical Values Enabled by Development of a Web Based Application
Samuel McCash, MD

9:35 - 9:45 AM Ten-minute break to switch lectures
9:45 - 10:20 AM A Proposed Framework for Deploying AI in the Clinical Laboratory
Jansen Seheult, MD
Are We in Need of a Smart Laboratory Information System?
Snehal Sonawane, MBBS, MD, FASCP

A Dynamically Generated Machine Learning Model to Identify Low Prevalence Sars-Cov-2 Samples for Pooled Pcr Testing
Andrew Laitman, MD, PhD

10:20 - 11:20 AM Break, Browse Exhibits, and Poster Session
 
11:20 - 12:00 PM Development of AI/ML Models for Tumor Classification Using Google AutoML Vision API
Dibson Gondim, MD
Striving For Laboratory Efficiency Nirvana: Accelerated Iterative Improvements to Scale Up COVID-19 Testing
Patrick Mathias, MD, PhD

Detecting Anomalous Laboratory Results Using Manifold Approximation
Nicholas Spies, MD

12:00 - 1:00 PM Lunch  
12:00 - 12:55 PM MENTORING ROUND TABLE
Room 306/307


Tuesday, May 10, 2022
Afternoon Session

Plenary Sessions

Room: Ballroom B

1:00 - 1:05 PM Opening Welcome to PI Summit 2022
J. Mark Tuthill and Ulysses G. J. Balis
1:05 - 1:40 PM Cybersecurity Risk Mitigation
Christy Wheaton
1:40 - 2:15 PM Operational Effects of a Ransomware Attack on a Regional Health System
John
Spinosa, MD, PhD, FACP
2:15- 2:45 PM Security Panel Discussion
Christy Wheaton, John Spinosa, Toby Cornish, David McClintock
2:45 - 2:50 PM Stand-up break
2:50 - 3:45 PM Multi-Scalar Data Integration Defines Tissue States and Disease Mechanism, a Cell at a Time
Matthias Kretzler, MD
3:45 - 4:15 PM Break/Browse Exhibits and Poster Sessions
4:15 - 4:45 PM Diamond Presentation - Hamamatsu
Talk title: Digital Pathology Validation of Diagnostic Fluorescence Microscopy in Anatomic Pathology
Presenter: Dylan Miller MD from Intermountain Healthcare
View the abstract
4:45 - 5:15 PM API Lifetime Achievement and Distinguished Services Awards Presentation
Toby Cornish, MD, API President
5:30 - 7:00 PM

Opening Night Reception
Location: DLCC Ballroom A (Exhibitor Ballroom)

7:15 - 9:00 PM

Women in Pathology Informatics Networking Event
Location: Westin Pittsburgh -  Washington Room

 

Wednesday, May 11, 2022

Short Abstract Presentations
*Running concurrently

8:00 - 9:00 AM Moderator: J. Mark Tuthill
Rooms: 301/302
Moderator: Ulysses Balis
Room: Ballroom B
Moderator: David McClintock
Rooms: 303/304


Morning Track Lectures

  Track 1: Digital Pathology
Rooms: 301/302
Moderator: Lisa-Jean Clifford

Track 2: Informatics and Management
Room: Ballroom B

Moderator: Jim Madory

Track 3: Selected Podium Presentations
Rooms: 303/304

Moderator: Peter Gershkovich

9:00 - 9:35 AM Digital Pathology Implementation - A Pathologist's Perspective
Rajendra Singh, MD
What Does the Patient Expect?
Ed Klatt, MD
SNOMED CT for Cancer Synoptic Reporting: Advancements since 2019

W. Scott Campbell, PhD, MBA

9:35 - 9:45 AM Ten-minute break to switch lectures
9:45 - 10:20 AM Development of Pathologist Training Materials using Consensus Driven Annotations of sTIL Assessment in Breast Cancer
Victor Garcia, MD
Direct Access Testing: Informatics Challenges and Opportunities
Michele Stoffel, MD, PhD
Developing Quality Standards for the College of American Pathologists ElectronicCancer Protocols
Colleen Hebert, DHA
10:20 - 11:20 AM Break, Browse Exhibits, and Poster Session
 
11:20 - 12:00 PM Approach to Clinical Validation for Clearing Histology with MultiPhoton Microscopy (CHiMP)
Richard Torres, MD
Academic-Industry Partnerships: Rules of Engagement
Liron Pantanowitz, MBBCh
Cancer Registry Collection and De-identification of Whole Slide Images at Population Scale
James Mays, MD
12:00 - 1:30 PM Lunch  
12:00 - 1:30 PM Travel Awardee Luncheon Room 306/307

 

Wednesday, May 11, 2022

Afternoon Track Lectures

  Track 1: Clinical Informatics and EHR
Rooms: 301/302
Moderator: David McClintock

Track 2: Analytics and Informatics
Room: Ballroom B

Moderator: Amrom Obstfeld

Track 3: DP/AI Topics
Rooms: 303/304

Moderator: Toby Cornish

1:30 - 2:05 PM Why Do People Ignore My Order Alert!?: Evaluation of Factors That Affect Compliance with Clinical Decision Support Tools
Ronald Jackups, MD, PhD
Data Analysis and Data Visualization for Pathology Projects: Common Mistakes and How to Avoid Them
Yonah Ziemba, MD
Strategies To Evaluate the Impact of Image Attributes on Algorithm Behavior
Mark Zarella, PhD
2:05 - 2:15 PM Ten-minute break to switch lectures
2:15 - 2:50 PM Incorporating Digital Pathology into an Integrated Electronic Health Record Workflow
John Ozolek, MD
Scaling Up with R in Production
Stephan Kadauke, MD, PhD
Amrom Obstfeld, MD, PhD
Digital Pathology Provides a Wealth of Data: What Are You Doing with it?
Lisa-Jean Clifford
2:50 - 3:00 PM Ten-minute break to switch lectures  
3:00 - 3:35 PM Exchanging Extended RBC Phenotyping and Genotyping Information: HL7 FHIR Implementation Guide Status
John Spinosa, MD, PhD, FACP
Laboratory-Led Population Health Services: What Enables Laboratories to Successfully Support Value-Based Care Initiative
Christopher Garcia, MD

Five Million Digital slides later: Workflow Lessons Learned
Orly Ardon, PhD, MBA

3:35 - 4:30 PM Break, Browse Exhibits, and Poster Session 
4:30 - 5:00 PM TOWN HALL
Ballroom B
5:00 - 5:45 PM API Block
Ballroom B

Thursday, May 12, 2022

API Focus Session:
Analytics, Machine Learning, and Artificial Intelligence
in the Clinical Laboratories

Room 303/304
Moderator: David McClintock

8:00 - 9:00 AM Journal of Pathology Informatics Editorial Board Meeting  - Room 306/307
8:00 - 9:00 AM Breakfast
9:00 - 9:40 AM

Informatics and Information Technology Tools for POCT Governance
Edward Leung, PhD, DABCC, FACB/FAACC

9:40 - 10:20 AM

Lessons Learned in Auto-verification in the Core Clinical Laboratory
Darci Block, PhD, DABCC

10:20 - 10:30 AM STANDING BREAK
10:30 - 11:10 AM

Basic Machine Learning to Improve and Personalize Laboratory Testing
Sarah Wheeler, PhD

11:10 - 11:50 AM

Constructing Machine Learning Models That Can Be Transferred Across Clinical Practices
Daniel Herman, MD, PhD

11:50 - 12:00 PM Closing remarks and adjournment
Mark Tuthill, MD & Ulysses Balis, MD